CDS

Accession Number TCMCG051C40088
gbkey CDS
Protein Id XP_024441458.1
Location join(10341745..10341783,10342083..10342208,10342291..10342449,10342999..10343082,10343159..10343287,10345219..10345434,10345843..10345974,10346095..10346190,10346497..10346658,10346976..10347267,10347365..10347490,10347576..10347645,10348761..10348824,10348942..10349010,10350111..10350644,10350790..10350824,10351708..10352242)
Gene LOC7457975
GeneID 7457975
Organism Populus trichocarpa

Protein

Length 955aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA17973
db_source XM_024585690.1
Definition nodulin homeobox [Populus trichocarpa]

EGGNOG-MAPPER Annotation

COG_category EG
Description single-stranded DNA binding
KEGG_TC 2.A.7
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko02000        [VIEW IN KEGG]
ko04131        [VIEW IN KEGG]
KEGG_ko ko:K15280        [VIEW IN KEGG]
ko:K17917        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04144        [VIEW IN KEGG]
map04144        [VIEW IN KEGG]
GOs GO:0000075        [VIEW IN EMBL-EBI]
GO:0000228        [VIEW IN EMBL-EBI]
GO:0000278        [VIEW IN EMBL-EBI]
GO:0000724        [VIEW IN EMBL-EBI]
GO:0000725        [VIEW IN EMBL-EBI]
GO:0000781        [VIEW IN EMBL-EBI]
GO:0000784        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003697        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005694        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006302        [VIEW IN EMBL-EBI]
GO:0006310        [VIEW IN EMBL-EBI]
GO:0006351        [VIEW IN EMBL-EBI]
GO:0006366        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0007049        [VIEW IN EMBL-EBI]
GO:0007093        [VIEW IN EMBL-EBI]
GO:0007346        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009301        [VIEW IN EMBL-EBI]
GO:0009314        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010212        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010638        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016073        [VIEW IN EMBL-EBI]
GO:0018130        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019438        [VIEW IN EMBL-EBI]
GO:0019899        [VIEW IN EMBL-EBI]
GO:0022402        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032204        [VIEW IN EMBL-EBI]
GO:0032206        [VIEW IN EMBL-EBI]
GO:0032774        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0033043        [VIEW IN EMBL-EBI]
GO:0033044        [VIEW IN EMBL-EBI]
GO:0033365        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034502        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0034654        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0042162        [VIEW IN EMBL-EBI]
GO:0042795        [VIEW IN EMBL-EBI]
GO:0043047        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043565        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044427        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044454        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0045786        [VIEW IN EMBL-EBI]
GO:0045930        [VIEW IN EMBL-EBI]
GO:0045935        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051052        [VIEW IN EMBL-EBI]
GO:0051054        [VIEW IN EMBL-EBI]
GO:0051128        [VIEW IN EMBL-EBI]
GO:0051130        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0051726        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070182        [VIEW IN EMBL-EBI]
GO:0070198        [VIEW IN EMBL-EBI]
GO:0070199        [VIEW IN EMBL-EBI]
GO:0070200        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0070876        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0072594        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097659        [VIEW IN EMBL-EBI]
GO:0098505        [VIEW IN EMBL-EBI]
GO:0098687        [VIEW IN EMBL-EBI]
GO:0098781        [VIEW IN EMBL-EBI]
GO:0098847        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901362        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1903047        [VIEW IN EMBL-EBI]
GO:1904353        [VIEW IN EMBL-EBI]
GO:1904355        [VIEW IN EMBL-EBI]
GO:2001252        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAGGCTTGCTAAGGAAGAACTGTCTATGGCTGAACAAGTCATTGATTTAATTTCAGCAGTGAAAGAGTTACACGGTCTTAGCTCTCAGGAGCTTAACAAATTGTTAAGGGACTCTGAAAATTTTACAATTCACTTTCATTCTGAAAAGGGATCAACGACAAAGATTGATGTGGAAAAACTGGCAGGCTTTCTTCCTTTACACCTTATTGCAGTGCTTATGTCATCTGATAGAGATGAATCGCTGTTGAGATATTTGTTGTGCGGGATTCGGCTTTTGCATTCCTTGTGTGATCTAGGACCTCGGAACAGTAAACTTGAGCAGGTTTTGCTTGATGATGTTAAAGTATCAGAGCAGCTGCTGGATCTGGTGTTTTATTTACTAATTGTTCTTGGTGGTTATAGACAGGAAAACCTTAATTCATGCTCTTTGTTACTTGTGCATTCAGCACTTGTGGCATCCAGTCTACATTTATTGTCAGGATGTATATCTTCACAATGGCAAGATCTTGTTCAAGTATTGCTTGCTCACCCCAAGGTTGACATATTTATGGATGCAGCTTTTGGTGCTGTTCATGTAGCCATTAGGTTTCTTCAGGTCAAGCTATCAGATCAACATACTGGCCTTCATGTGAAAAGTCCAACAGCTGAACAAATAGTTAATTATATCTGCCAACAATGTGAGGCTTCTTTACAGACTCTTCAGTCATTGTGCCAGCAAAAGATGTTCCGCGAGCGCCTTCTTAGGAACAAGGAACTATGTGGAAGGGGAGGTGTTCTTTTTCTGGCCCAGGCCATCTTGAAGTTAAACATCACGCCTCCTTTTGTAGATTCTTTCACAGTTGTAGCTGCAGTATCTAGACTGAAGGCTAAAGTATTATCGATTCTATTGCATCTGTGTGAAGCAGAAAGCATTTCTTACCTTGATGAGGTTGCAAGCTCTCCATGGAGCCTTGATTTGGCAAAGTCTGTAGTATTAGAGATTCTTGAATTACTGAAGGCTGCACTTAGCAAAGATCCCAATCATCTTAGTCCATGTTCAGACAGAACTTTTCCCATGGGGCTTTTGCGACTCAATGCAATGCGTCTGGCTGATATCTTCTCAGATGATTCAAATTTTAGATCTTATATCACAACATGCTTTACCAAAGTTCTGACTGCTATATTTTCGCTCCCTCATGGAGATTTTTTATCAATTTGGTGTTCTTCTGAATTTCCACCAAGAGAAGAAGATGGTACTCTGGAGTATGATGCATTTACAGCAGCTGGGTGGTTTTTGGACACATTTGCAGCAGCGAACCAATCAAATGCAATAAATTTAGAAATCACTTTAATTCCCAGCAACATGCCCCAAGCTATGTATGCACATCAGAGAACTTCATTATTTGTGAAGCTAATTGCCAACCTCCACTGTTTTGTTCCAAACATATGTGAAGAGCAGGAAAGAAACTTGTTCCTTCATAAGTTTCTGGAGTGCATGCGGATGGACCCATCTAAGTCATTGCCTGGGTTTTCCTTTACTTCTGGTGCTCTAAGAGCCGTAACAGTTTGCAGGAACCTTCGTTCATTGTTAAGTCATGCAGAGTCTCTAATTCCTAACTTTTTGAATGAGGAGGATGTACAGCTGCTAAGGGTATTCTTTAACCAGTTACAATCACTGATTAATCCTACTGATTTTGAAGAAAACCAAGTTCAAGAAATCAAATCTGAGAGGTCAATATCTTTGGATAAGTTCTGTAGACTTACTATTGATGAGCATCTTCAGGAAGCTCAAAGCACTGGGGCATACGGATCACCTATGGTGATGAAGGAACCTTCACATCTTTACAACAGGACAGATATCCAAAAAGAGGAAATGTCAGAGAATTCAGCTATCCAAGAAGAGGAGAAGCCCAATTTCAAAAATAGGAATCAAGCAGAAGATGCAATTAAGGAAGACAAAGCTAAACCTGGTGCATGTGTATCTGATGTTTTAAGAGAGATTGATAGAGATGCTCATACTGTTGAAACAAGTGGTTCAGATACAAGTTCCACTAGAGGGAAGACTTATGCAGGTCAAGTGGTGAATGGTGACTTTCTAAAATCAAGTGAGCATATAAAACGAAATGGTTGTCAGGGAGTTTGTGGTGGTGAGAAAGTTGAAAGTCCTCATTTTGAAGAAAAGCAGCCAAGAAAAAGGAAGCGGACTATTATGAATGACCATCAAATCACACTTATGGAGAAAGCCCTGCTAGATGAACCTGAGATGCAGAGAAATGCAGCAGCGTTACAGTCATGGGCTGATAAATTGAGTCTTCATGGATCAGAAGTTACACCTTCACAACTGAAAAATTGGCTCAACAATCGCAAAGCGAGGTTAGCTCGTGCAGGCAAGGATGTCCGTGCACCAATGGAGGTTGATAATACATTTCCAGAAAAACAAGTTGGACAAGCGCAGCAGCAGGACACACCTGAGAGCCCCAGTGAAGACAACATCACATCGAGTGCAAGAGGCCTTCAAAACACATCAGAAATTGGCGTGTTTGGAGATCCCGAGGCTGGGATAGGATTGGCAGACTTTGTTGACATTGGTGCTTCAGAATTTGTTCAGTGCAAGCCAGGGCAGTTTGTTGTGCTTGTAGACGGGCAAGGAGAAGAGATTGGTAAGGGAAAGGTATATCAGGTGCAAGGCAAATGGTATGGAAGGATATTGGAGGAATCAGAGATGTGTGTCGTGGATGTTACAGAGCTCAAGACTGAGAAATGGGTGAGGCTTCCATACCCATCCGAAACCACAGGCATGTCATTTTATGAAGCTGAACAGAAGATTGGGGTGATGAGAGTGTTGTGGGATTCGAACAAAATATACATGTCACGACCTCAATGCTAG
Protein:  
MRLAKEELSMAEQVIDLISAVKELHGLSSQELNKLLRDSENFTIHFHSEKGSTTKIDVEKLAGFLPLHLIAVLMSSDRDESLLRYLLCGIRLLHSLCDLGPRNSKLEQVLLDDVKVSEQLLDLVFYLLIVLGGYRQENLNSCSLLLVHSALVASSLHLLSGCISSQWQDLVQVLLAHPKVDIFMDAAFGAVHVAIRFLQVKLSDQHTGLHVKSPTAEQIVNYICQQCEASLQTLQSLCQQKMFRERLLRNKELCGRGGVLFLAQAILKLNITPPFVDSFTVVAAVSRLKAKVLSILLHLCEAESISYLDEVASSPWSLDLAKSVVLEILELLKAALSKDPNHLSPCSDRTFPMGLLRLNAMRLADIFSDDSNFRSYITTCFTKVLTAIFSLPHGDFLSIWCSSEFPPREEDGTLEYDAFTAAGWFLDTFAAANQSNAINLEITLIPSNMPQAMYAHQRTSLFVKLIANLHCFVPNICEEQERNLFLHKFLECMRMDPSKSLPGFSFTSGALRAVTVCRNLRSLLSHAESLIPNFLNEEDVQLLRVFFNQLQSLINPTDFEENQVQEIKSERSISLDKFCRLTIDEHLQEAQSTGAYGSPMVMKEPSHLYNRTDIQKEEMSENSAIQEEEKPNFKNRNQAEDAIKEDKAKPGACVSDVLREIDRDAHTVETSGSDTSSTRGKTYAGQVVNGDFLKSSEHIKRNGCQGVCGGEKVESPHFEEKQPRKRKRTIMNDHQITLMEKALLDEPEMQRNAAALQSWADKLSLHGSEVTPSQLKNWLNNRKARLARAGKDVRAPMEVDNTFPEKQVGQAQQQDTPESPSEDNITSSARGLQNTSEIGVFGDPEAGIGLADFVDIGASEFVQCKPGQFVVLVDGQGEEIGKGKVYQVQGKWYGRILEESEMCVVDVTELKTEKWVRLPYPSETTGMSFYEAEQKIGVMRVLWDSNKIYMSRPQC